Fits community site occupancy models to environmental DNA metabarcoding data collected using spatially-replicated survey design. Model fitting results can be used to evaluate and compare the effectiveness of species detection to find an efficient survey design. Reference: Fukaya et al. (2022) <doi:10.1111/2041-210X.13732>, Fukaya and Hasebe (2025) <doi:10.1002/1438-390X.12219>.
Version: 1.2.1 Depends: jagsUI, R (≥ 2.10) Imports: stats, methods, graphics, checkmate, crayon, knitr Suggests: covr, rmarkdown, spelling, testthat (≥ 3.0.0), tibble, vdiffr Published: 2025-07-16 DOI: 10.32614/CRAN.package.occumb Author: Keiichi Fukaya [aut, cre], Ken Kellner [cph] (summary method for occumbFit class), Mika Takahashi [aut] Maintainer: Keiichi Fukaya <fukayak99 at gmail.com> BugReports: https://github.com/fukayak/occumb/issues License: GPL (≥ 3) URL: https://fukayak.github.io/occumb/, https://github.com/fukayak/occumb NeedsCompilation: no SystemRequirements: JAGS (http://mcmc-jags.sourceforge.net) Language: en-US Materials: README, NEWS CRAN checks: occumb results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=occumb to link to this page.
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