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CRAN: Package qtl2pleio

qtl2pleio: Testing Pleiotropy in Multiparental Populations

We implement an adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing the null hypothesis of pleiotropy against the alternative hypothesis, two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111> and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in that our test accommodates multiparental populations.

Version: 1.4.3 Depends: R (≥ 3.2) Imports: dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble, parallel LinkingTo: Rcpp, RcppEigen Suggests: covr, mvtnorm, knitr, rmarkdown, testthat, broman, devtools, qtl2, parallelly Published: 2020-12-02 DOI: 10.32614/CRAN.package.qtl2pleio Author: Frederick J Boehm [aut, cre] Maintainer: Frederick J Boehm <frederick.boehm at gmail.com> BugReports: https://github.com/fboehm/qtl2pleio/issues License: MIT + file LICENSE URL: https://github.com/fboehm/qtl2pleio NeedsCompilation: yes Language: en-US Citation: qtl2pleio citation info Materials: README, NEWS CRAN checks: qtl2pleio results Documentation: Downloads: Linking:

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