Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>.
Version: 2.3.2 Depends: R (≥ 3.5.0) Imports: aplot, dplyr, ggplot2, grid, ggh4x, readr, tibble, tidyr, ggprism, patchwork, ggplotify, magrittr, progress, stats, methods, grDevices, tidygraph, ggraph, utils Suggests: Biobase, KEGGREST, ComplexHeatmap, BiocGenerics, knitr, rmarkdown, testthat (≥ 3.0.0), ALDEx2, DESeq2, edgeR, GGally, limma, Maaslin2, metagenomeSeq, MicrobiomeStat, SummarizedExperiment, circlize, lefser, fgsea, clusterProfiler, enrichplot, DOSE, pathview, ggVennDiagram, UpSetR, igraph Published: 2025-07-16 DOI: 10.32614/CRAN.package.ggpicrust2 Author: Chen Yang [aut, cre], Liangliang Zhang [aut] Maintainer: Chen Yang <cafferychen7850 at gmail.com> BugReports: https://github.com/cafferychen777/ggpicrust2/issues License: MIT + file LICENSE URL: https://github.com/cafferychen777/ggpicrust2, https://cafferyang.com/ggpicrust2/ NeedsCompilation: no Materials: README, NEWS CRAN checks: ggpicrust2 results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=ggpicrust2 to link to this page.
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