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CRAN: Package smer

smer: Sparse Marginal Epistasis Test

The Sparse Marginal Epistasis Test is a computationally efficient genetics method which detects statistical epistasis in complex traits; see Stamp et al. (2025, <doi:10.1101/2025.01.11.632557>) for details.

Version: 0.0.1 Depends: R (≥ 4.4.0) Imports: dplyr, genio, logging, mvMAPIT, Rcpp, tidyr LinkingTo: BH, Rcpp, RcppEigen, Rhdf5lib, testthat Suggests: GenomicRanges, ggplot2, knitr, rmarkdown, testthat (≥ 3.0.0), xml2 Published: 2025-01-16 DOI: 10.32614/CRAN.package.smer Author: Julian Stamp [cre, aut], Lorin Crawford [aut], sriramlab [cph] (Author of included mailman algorithm), Blue Brain Project/EPFL [cph] (Author of included HighFive library) Maintainer: Julian Stamp <julian.d.stamp at gmail.com> BugReports: https://github.com/lcrawlab/sme/issues License: MIT + file LICENSE URL: https://github.com/lcrawlab/sme, https://lcrawlab.github.io/sme/ NeedsCompilation: yes SystemRequirements: GNU make Materials: README NEWS CRAN checks: smer results Documentation: Downloads: Linking:

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