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hsphase: Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

Version: 2.0.4 Depends: snowfall, R (≥ 3.1.0) Imports: Rcpp LinkingTo: RcppArmadillo (≥ 0.4.300.8.0), Rcpp (≥ 0.11.2) Published: 2025-04-06 DOI: 10.32614/CRAN.package.hsphase Author: Mohammad Ferdosi [aut, cre], Cedric Gondro [aut] Maintainer: Mohammad Ferdosi <mhferdosi at yahoo.com> License: GPL-3 NeedsCompilation: yes Citation: hsphase citation info CRAN checks: hsphase results Documentation: Reference manual: hsphase.pdf Vignettes: A brief vignette to illustrate the usage of the main functions of hsphase (source, R code)
Downloads: Package source: hsphase_2.0.4.tar.gz Windows binaries: r-devel: hsphase_2.0.4.zip, r-release: hsphase_2.0.4.zip, r-oldrel: hsphase_2.0.4.zip macOS binaries: r-release (arm64): hsphase_2.0.4.tgz, r-oldrel (arm64): hsphase_2.0.4.tgz, r-release (x86_64): hsphase_2.0.4.tgz, r-oldrel (x86_64): hsphase_2.0.4.tgz Old sources: hsphase archive Reverse dependencies: Reverse imports: hsrecombi Linking:

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