Analysis of molecular marker data from model and non-model systems. For the later, it allows statistical analysis by simultaneously estimating linkage and linkage phases (genetic map construction) according to Wu and colleagues (2002) <doi:10.1006/tpbi.2002.1577>. All analysis are based on multi-point approaches using hidden Markov models.
Version: 3.2.2 Depends: R (≥ 3.6.0) Imports: ggplot2 (≥ 2.2.1), plotly (≥ 4.7.1), reshape2 (≥ 1.4.1), Rcpp (≥ 0.10.5), graphics, methods, stats, utils, grDevices, smacof, princurve, parallel, dplyr, tidyr, htmlwidgets, ggpubr, RColorBrewer, dendextend, rebus, vcfR (≥ 1.6.0) LinkingTo: Rcpp (≥ 1.0.0) Suggests: knitr (≥ 1.10), rmarkdown, testthat, stringr Published: 2025-05-16 DOI: 10.32614/CRAN.package.onemap Author: Gabriel Margarido [aut], Marcelo Mollinari [aut], Cristiane Taniguti [ctb, cre], Getulio Ferreira [ctb], Rodrigo Amadeu [ctb], Jeekin Lau [ctb], Karl Broman [ctb], Katharine Preedy [ctb, cph] (MDS ordering algorithm), Bastian Schiffthaler [ctb, cph] (HMM parallelization), Augusto Garcia [aut, ctb] Maintainer: Cristiane Taniguti <cht47 at cornell.edu> BugReports: https://github.com/Cristianetaniguti/onemap/issues License: GPL-3 URL: https://github.com/cristianetaniguti/onemap NeedsCompilation: yes Citation: onemap citation info Materials: NEWS In views: Agriculture CRAN checks: onemap results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=onemap to link to this page.
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