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NEWS

• Now it is possible to list sets and elements that are not present in the relations but might be on the object via its factors: name_sets(), name_elements(), nElements() and nSets() gain a all argument.
• Fix a problem with $<- when the length did match a slot but the name didn’t.
• Now it is possible to use sets and elements to subset a TidySet (but not for relations).
• New dimnames() and names() functions to discover the names of the data in the slots.
• Minor changes to getGAF() to improve speed.
• Increase R version dependency to 4.1 to remove magrittr dependency.

• tidy() now defaults to tidySet().
• New function union_closed().
• Make more robust the code to unwanted dimensions drops.
• power_set() returns also the sets of size 1 and have better names by default.
• Extractors [, $, [[ and setters [<-, $<-, [[<- now work for TidySets:
  • i indicates rows,
  • j either “relations”, “sets” or “elements”
  • k the columns of the slot.
  However TS[["A"]] extracts set “A” and replacing it via [[<- will remove it.
• Completion of $ works.
• length() returns the number of sets (to complete ncol and nrow).
• lengths() returns the number of relations for each set.

• Fixing test when missing a package.
• Adding copyright holder.

• Update Code of Conduct to rOpenSci template
• Fix NOTE about LazyData

• Upgrade R version requirements
• Fix some links
• Make sure that vignettes run when the Bioconductor packages are available

• Remove unused dependency to BiocStyle
• Fix unicode characters for windows

• Added a NEWS.md file to track changes to the package.

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