Calculates the number of four-taxon subtrees consistent with a pair of cladograms, calculating the symmetric quartet distance of Bandelt & Dress (1986), Reconstructing the shape of a tree from observed dissimilarity data, Advances in Applied Mathematics, 7, 309-343 <doi:10.1016/0196-8858(86)90038-2>, and using the tqDist algorithm of Sand et al. (2014), tqDist: a library for computing the quartet and triplet distances between binary or general trees, Bioinformatics, 30, 2079â2080 <doi:10.1093/bioinformatics/btu157> for pairs of binary trees.
Version: 1.2.7 Depends: R (≥ 3.5.0), TreeTools (≥ 1.4.0) Imports: ape, PlotTools, Rdpack (≥ 0.7), Ternary (≥ 1.0), viridisLite LinkingTo: Rcpp Suggests: bookdown, knitr, phangorn, Rcpp, rmarkdown, testthat, usethis, vdiffr Published: 2024-10-31 DOI: 10.32614/CRAN.package.Quartet Author: Martin R. Smith [aut, cre, cph], Andreas Sand [ant], Gerth Stølting Brodal [ant], Rolf Fagerberg [ant], Thomas Mailund [ant], Christian N. S. Pedersen [ant], Jens Johansen [ant], Morten K. Holt [ant] Maintainer: Martin R. Smith <martin.smith at durham.ac.uk> BugReports: https://github.com/ms609/Quartet/issues/ License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] Copyright: Incorporates code modified from tqDist <doi:10.1093/bioinformatics/btu157>. URL: https://ms609.github.io/Quartet/, https://github.com/ms609/Quartet/ NeedsCompilation: yes Language: en-GB Citation: Quartet citation info Materials: README NEWS In views: Phylogenetics CRAN checks: Quartet results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=Quartet to link to this page.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4