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CRAN: Package eSIR

eSIR: Extended State-Space SIR Models

An implementation of extended state-space SIR models developed by Song Lab at UM school of Public Health. There are several functions available by 1) including a time-varying transmission modifier, 2) adding a time-dependent quarantine compartment, 3) adding a time-dependent antibody-immunization compartment. Wang L. (2020) <doi:10.6339/JDS.202007_18(3).0003>.

Version: 0.4.2 Depends: R (≥ 3.5.2) Imports: coda (≥ 0.19.3), chron (≥ 2.3.54), data.table (≥ 1.12.0), ggplot2 (≥ 3.2.1), grDevices (≥ 3.5.2), graphics (≥ 3.5.2), gtools (≥ 3.8.1), scales (≥ 1.1.0), stats (≥ 3.5.2), reshape2 (≥ 1.4.3), rjags (≥ 4.10), utils (≥ 3.5.2) Suggests: testthat (≥ 3.0.0) Published: 2021-12-10 DOI: 10.32614/CRAN.package.eSIR Author: Lili Wang [aut], Song Lab [aut] (<http://websites.umich.edu/~songlab/>), Paul Egeler [ctb] (Spectrum Health Office of Research and Education), Michael Kleinsasser [cre] Maintainer: Michael Kleinsasser <biostat-cran-manager at umich.edu> License: CC BY 4.0 NeedsCompilation: no Materials: README CRAN checks: eSIR results Documentation: Downloads: Linking:

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