A flexible tool for enrichment analysis based on user-defined sets. It allows users to perform over-representation analysis of the custom sets among any specified ranked feature list, hence making enrichment analysis applicable to various types of data from different scientific fields. 'EnrichIntersect' also enables an interactive means to visualize identified associations based on, for example, the mix-lasso model (Zhao et al., 2022 <doi:10.1016/j.isci.2022.104767>) or similar methods.
Version: 0.7 Depends: R (≥ 4.0) Imports: ggplot2, dplyr, networkD3, jsonlite, htmlwidgets, webshot2, stats, methods, grDevices Suggests: knitr Published: 2024-03-14 DOI: 10.32614/CRAN.package.EnrichIntersect Author: Zhi Zhao [aut, cre], Manuela Zucknick [aut], Tero Aittokallio [ctb] Maintainer: Zhi Zhao <zhi.zhao at medisin.uio.no> BugReports: https://github.com/ocbe-uio/EnrichIntersect/issues License: MIT + file LICENSE URL: https://github.com/ocbe-uio/EnrichIntersect NeedsCompilation: no Citation: EnrichIntersect citation info Materials: README, NEWS CRAN checks: EnrichIntersect results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=EnrichIntersect to link to this page.
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