Provides tools for performing Bayesian inference on epidemiological data to estimate the time-varying reproductive number and other related metrics. These methods were published in Li and White (2021) <doi:10.1371/journal.pcbi.1009210>. This package supports analyses based on aggregated case count data and individual line list data, facilitating enhanced surveillance and intervention planning for infectious diseases like COVID-19.
Version: 1.0 Depends: R (≥ 2.10) Imports: Rcpp (≥ 1.0.11), magrittr, lubridate, coda, dplyr LinkingTo: Rcpp, RcppArmadillo Suggests: knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2024-05-03 DOI: 10.32614/CRAN.package.linelistBayes Author: Chad Milando [aut, cre], Tenglong Li [ctb], Laura White [ctb] Maintainer: Chad Milando <cmilando at bu.edu> License: GPL-3 NeedsCompilation: yes Materials: README In views: Epidemiology CRAN checks: linelistBayes results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=linelistBayes to link to this page.
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