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CRAN: Package dMod

dMod: Dynamic Modeling and Parameter Estimation in ODE Models

The framework provides functions to generate ODEs of reaction networks, parameter transformations, observation functions, residual functions, etc. The framework follows the paradigm that derivative information should be used for optimization whenever possible. Therefore, all major functions produce and can handle expressions for symbolic derivatives. The methods used in dMod were published in Kaschek et al, 2019, <doi:10.18637/jss.v088.i10>.

Version: 1.0.2 Depends: cOde (≥ 1.0) Imports: deSolve, rootSolve, ggplot2, parallel, stringr, plyr, dplyr, foreach, doParallel Suggests: MASS, reticulate, pander, knitr, rmarkdown Published: 2021-01-27 DOI: 10.32614/CRAN.package.dMod Author: Daniel Kaschek Maintainer: Daniel Kaschek <daniel.kaschek at gmail.com> License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] NeedsCompilation: no Citation: dMod citation info In views: DifferentialEquations CRAN checks: dMod results Documentation: Downloads: Linking:

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