Facilities for running simulations from ordinary differential equation ('ODE') models, such as pharmacometrics and other compartmental models. A compilation manager translates the ODE model into C, compiles it, and dynamically loads the object code into R for improved computational efficiency. An event table object facilitates the specification of complex dosing regimens (optional) and sampling schedules. NB: The use of this package requires both C and Fortran compilers, for details on their use with R please see Section 6.3, Appendix A, and Appendix D in the "R Administration and Installation" manual. Also the code is mostly released under GPL. The 'VODE' and 'LSODA' are in the public domain. The information is available in the inst/COPYRIGHTS.
Version: 3.0.4 Depends: R (≥ 4.0.0) Imports: PreciseSums (≥ 0.7), Rcpp (≥ 0.12.3), backports, cli (≥ 2.0.0), checkmate, ggplot2 (≥ 3.4.0), inline, lotri (≥ 1.0.0), magrittr, memoise, methods, rex, sys, tools, utils, dparser (≥ 1.3.1-12), rxode2ll (≥ 2.0.9), data.table (≥ 1.12.4), qs (≥ 0.26.3) LinkingTo: sitmo, lotri (≥ 1.0.0), PreciseSums (≥ 0.7), Rcpp, RcppArmadillo (≥ 0.9.300.2.0), BH, RcppParallel, RcppEigen (≥ 0.3.3.9.2), StanHeaders (≥ 2.21.0.7), dparser (≥ 1.3.1-12) Suggests: Matrix, DT, covr, crayon, curl, digest, dplyr (≥ 0.8.0), ggrepel, gridExtra, htmltools, knitr, learnr, microbenchmark, nlme, remotes, rlang, rmarkdown, scales, shiny, stringi, symengine, testthat, tidyr, usethis, vdiffr (≥ 1.0), withr, xgxr, pillar, tibble, units (≥ 0.6-0), rsconnect, devtools, patchwork, nlmixr2data, lifecycle, kableExtra Published: 2025-02-14 DOI: 10.32614/CRAN.package.rxode2 Author: Matthew L. Fidler [aut, cre], Wenping Wang [aut], Alan Hindmarsh [ctb], Arun Srinivasan [ctb], Awad H. Al-Mohy [ctb], Bill Denney [ctb], Cleve Moler [ctb], David Cooley [ctb], Drew Schmidt [ctb], Ernst Hairer [ctb], Gabriel Staples [ctb], Gerhard Wanner [ctb], Gilbert Stewart [ctb], Goro Fuji [ctb], Hadley Wickham [ctb], Igor Kushnir [ctb], Jack Dongarra [ctb], Jim Bunch [ctb], Kevin Ushey [ctb], Linda Petzold [ctb], Martin Maechler [ctb], Matt Dowle [ctb], Matteo Fasiolo [ctb], Melissa Hallow [aut], Michel Lang [ctb], Morwenn [ctb], Nicholas J. Higham [ctb], Omar Elashkar [ctb], Richard Upton [ctb], Roger B. Sidje [ctb], Simon Frost [ctb], Yu Feng [ctb], Zufar Mulyukov [ctb] Maintainer: Matthew L. Fidler <matthew.fidler at gmail.com> BugReports: https://github.com/nlmixr2/rxode2/issues/ License: GPL (≥ 3) Copyright: see file COPYRIGHTS URL: https://nlmixr2.github.io/rxode2/, https://github.com/nlmixr2/rxode2/ NeedsCompilation: yes Language: en-US Citation: rxode2 citation info Materials: README NEWS In views: DifferentialEquations, HighPerformanceComputing, MixedModels, Pharmacokinetics CRAN checks: rxode2 resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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