Create simplex plots to visualize the similarity between single-cells and selected clusters in a 1-/2-/3-simplex space. Velocity information can be added as an additional layer. See Liu J, Wang Y et al (2023) <doi:10.1093/bioinformatics/btaf119> for more details.
Version: 0.2.0 Depends: stats, methods, grDevices, R (≥ 3.6) Imports: cli, ggplot2, Matrix, plot3D, plotly, RColorBrewer, Rcpp, rlang, viridis LinkingTo: Rcpp, RcppArmadillo Suggests: hdf5r, knitr, magick, patchwork, rmarkdown, Seurat, SeuratObject, SingleCellExperiment, SummarizedExperiment, testthat (≥ 3.0.0) Published: 2025-04-23 DOI: 10.32614/CRAN.package.CytoSimplex Author: Yichen Wang [aut, cre], Jialin Liu [aut], Joshua Welch [cph] Maintainer: Yichen Wang <wayichen at umich.edu> License: GPL-3 URL: https://welch-lab.github.io/CytoSimplex/, https://github.com/welch-lab/CytoSimplex NeedsCompilation: yes Materials: README NEWS CRAN checks: CytoSimplex resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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