Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <doi:10.1093/nargab/lqac022>.
Version: 0.2.5 Depends: R (≥ 3.5.0) Imports: FNN, irlba, numbers, fpc, bluster, igraph, matrixStats, utils Suggests: testthat (≥ 2.1.0), Seurat, SingleCellExperiment, SummarizedExperiment, scater, batchelor, scran, knitr, rmarkdown, patchwork, ggplot2 Published: 2023-12-08 DOI: 10.32614/CRAN.package.Canek Author: Martin Loza [aut, cre], Diego Diez [aut] Maintainer: Martin Loza <martin.loza.lopez at gmail.com> BugReports: https://github.com/MartinLoza/Canek/issues License: MIT + file LICENSE URL: https://martinloza.github.io/Canek/ NeedsCompilation: no Citation: Canek citation info Materials: README, NEWS CRAN checks: Canek resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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