Functions for processing, analysis and visualization of Hydrogen Deuterium eXchange monitored by Mass Spectrometry experiments (HDX-MS) (<doi:10.1093/bioinformatics/btaa587>). 'HaDeX' introduces a new standardized and reproducible workflow for the analysis of the HDX-MS data, including novel uncertainty intervals. Additionally, it covers data exploration, quality control and generation of publication-quality figures. All functionalities are also available in the in-built 'Shiny' app.
Version: 1.2.3 Depends: R (≥ 3.0) Imports: data.table, dplyr, ggplot2, latex2exp, reshape2, readr, readxl, shiny, tidyr Suggests: spelling, covr, digest, DT, gridExtra, gsubfn, knitr, pander, renv, rmarkdown, shinycssloaders, shinyhelper, shinyjs, stringr, testthat, vdiffr Published: 2025-07-04 DOI: 10.32614/CRAN.package.HaDeX Author: Weronika Puchala [cre, aut], Michal Burdukiewicz [aut], Dominik Rafacz [ctb] Maintainer: Weronika Puchala <puchala.weronika at gmail.com> License: GPL-3 NeedsCompilation: no Language: en-US Materials: README, ChangeLog In views: ChemPhys CRAN checks: HaDeX results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=HaDeX to link to this page.
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