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CRAN: Package SAMtool

Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform data-rich fisheries. 'SAMtool' provides a conditioning model, assessment models of varying complexity with standardized reporting, model-based management procedures, and diagnostic tools for evaluating assessments inside closed-loop simulation.

Version: 1.8.1 Depends: R (≥ 3.5.0), MSEtool (≥ 3.0.0) Imports: TMB (≥ 1.9.0), abind, dplyr, gplots, graphics, methods, pbapply, rmarkdown, snowfall, stats, utils, vars LinkingTo: TMB, RcppEigen Suggests: caret, corpcor, covr, extraDistr, ggplot2, Gmisc, knitr, mvtnorm, numDeriv, reshape2, shiny, testthat, tmbstan, usethis Published: 2025-04-28 DOI: 10.32614/CRAN.package.SAMtool Author: Quang Huynh [aut, cre], Tom Carruthers [aut], Adrian Hordyk [aut] Maintainer: Quang Huynh <quang at bluematterscience.com> BugReports: https://github.com/Blue-Matter/SAMtool/issues License: GPL-3 URL: https://openmse.com, https://samtool.openmse.com, https://github.com/Blue-Matter/SAMtool NeedsCompilation: yes Materials: README NEWS CRAN checks: SAMtool results

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