Bayesian reconstruction of disease outbreaks using epidemiological and genetic information. Jombart T, Cori A, Didelot X, Cauchemez S, Fraser C and Ferguson N. 2014. <doi:10.1371/journal.pcbi.1003457>. Campbell, F, Cori A, Ferguson N, Jombart T. 2019. <doi:10.1371/journal.pcbi.1006930>.
Version: 1.1.3 Depends: R (≥ 3.5.0) Imports: utils, methods, stats, grDevices, Rcpp, ape, ggplot2, magrittr, visNetwork LinkingTo: Rcpp Suggests: coda, microbenchmark, testthat, knitr, rmarkdown, igraph, epicontacts, adegenet Published: 2022-05-23 DOI: 10.32614/CRAN.package.outbreaker2 Author: Thibaut Jombart [aut], Finlay Campbell [aut, cre], Rich Fitzjohn [aut], Gerry Tonkin-Hill [ctb], Kristjan Eldjarn [ctb], Alexis Robert [ctb] Maintainer: Finlay Campbell <finlaycampbell93 at gmail.com> License: MIT + file LICENSE NeedsCompilation: yes SystemRequirements: C++11 Citation: outbreaker2 citation info Materials: README, NEWS In views: Epidemiology CRAN checks: outbreaker2 results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=outbreaker2 to link to this page.
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