Implements functions for working with absorbing Markov chains. The implementation is based on the framework described in "Toward a unified framework for connectivity that disentangles movement and mortality in space and time" by Fletcher et al. (2019) <doi:10.1111/ele.13333>, which applies them to spatial ecology. This framework incorporates both resistance and absorption with spatial absorbing Markov chains (SAMC) to provide several short-term and long-term predictions for metrics related to connectivity in landscapes. Despite the ecological context of the framework, this package can be used in any application of absorbing Markov chains.
Version: 4.0.0 Depends: R (≥ 3.6.0) Imports: methods, Matrix (≥ 1.5-3), raster, terra (≥ 1.7-3), circular LinkingTo: Rcpp (≥ 1.0.10), RcppEigen (≥ 0.3.3.9.3), RcppThread (≥ 2.1.3) Suggests: knitr, rmarkdown, testthat, gdistance, viridisLite Published: 2024-10-30 DOI: 10.32614/CRAN.package.samc Author: Andrew Marx [aut, cre, cph], Robert Fletcher [ctb], Miguel Acevedo [ctb], Jorge Sefair [ctb], Chao Wang [ctb], Hughes Josie [ctb], Barrett Griffin [ctb] Maintainer: Andrew Marx <ajm.rpackages at gmail.com> BugReports: https://github.com/andrewmarx/samc/issues/ License: AGPL (≥ 3) URL: https://andrewmarx.github.io/samc/ NeedsCompilation: yes Citation: samc citation info Materials: NEWS CRAN checks: samc results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=samc to link to this page.
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