Performing cell type annotation based on cell markers from a unified database. The approach utilizes correlation-based approach combined with association analysis using Fisher-exact and phyper statistical tests (Upton, Graham JG. (1992) <doi:10.2307/2982890>).
Version: 0.1.1 Imports: Seurat, dplyr, plyr, scales, HGNChelper, openxlsx Published: 2024-03-13 DOI: 10.32614/CRAN.package.sccca Author: Mohamed Soudy [aut, cre], Sophie LE BARS [aut], Enrico Glaab [aut] Maintainer: Mohamed Soudy <Mohmedsoudy2009 at gmail.com> License: GPL (≥ 3) NeedsCompilation: no CRAN checks: sccca results Documentation: Reference manual: sccca.html , sccca.pdf Downloads: Package source: sccca_0.1.1.tar.gz Windows binaries: r-devel: sccca_0.1.1.zip, r-release: sccca_0.1.1.zip, r-oldrel: sccca_0.1.1.zip macOS binaries: r-release (arm64): sccca_0.1.1.tgz, r-oldrel (arm64): sccca_0.1.1.tgz, r-release (x86_64): sccca_0.1.1.tgz, r-oldrel (x86_64): sccca_0.1.1.tgz Old sources: sccca archive Linking:Please use the canonical form https://CRAN.R-project.org/package=sccca to link to this page.
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