This function performs genomic prediction of cross performance using genotype and phenotype data. It processes data in several steps including loading necessary software, converting genotype data, processing phenotype data, fitting mixed models, and predicting cross performance based on weighted marker effects. For more information, see Labroo et al. (2023) <doi:10.1007/s00122-023-04377-z>.
Version: 0.1.0 Depends: R (≥ 2.10) Imports: BiocManager, Rcpp, dplyr, sommer, AGHmatrix, snpStats, VariantAnnotation, tools, magrittr, methods LinkingTo: Rcpp, RcppArmadillo Suggests: knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2024-11-06 DOI: 10.32614/CRAN.package.gpcp Author: Marlee Labroo [aut], Christine Nyaga [cre, aut], Lukas Mueller [aut] Maintainer: Christine Nyaga <cmn92 at cornell.edu> License: GPL (≥ 3) NeedsCompilation: yes Materials: README CRAN checks: gpcp results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=gpcp to link to this page.
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