For biparental, three and four-way crosses Identity by Descent (IBD) probabilities can be calculated using Hidden Markov Models and inheritance vectors following Lander and Green (<https://www.jstor.org/stable/29713>) and Huang (<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris.
Version: 1.0.9 Depends: R (≥ 3.6) Imports: data.table, ggplot2, Matrix, R.utils, rlang, Rcpp, statgenGWAS (≥ 1.0.9), stringi LinkingTo: Rcpp, RcppArmadillo Suggests: rmarkdown, knitr, tinytest Published: 2025-07-01 DOI: 10.32614/CRAN.package.statgenIBD Author: Martin Boer [aut], Bart-Jan van Rossum [aut, cre], Wenhao Li [ctb], Johannes Kruisselbrink [ctb] Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> BugReports: https://github.com/Biometris/statgenIBD/issues License: GPL-2 | GPL-3 [expanded from: GPL] URL: https://biometris.github.io/statgenIBD/index.html, https://github.com/Biometris/statgenIBD/ NeedsCompilation: yes Materials: README NEWS In views: Agriculture CRAN checks: statgenIBD results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=statgenIBD to link to this page.
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