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CRAN: Package gkmSVM

gkmSVM: Gapped-Kmer Support Vector Machine

Imports the 'gkmSVM' v2.0 functionalities into R <https://www.beerlab.org/gkmsvm/> It also uses the 'kernlab' library (separate R package by different authors) for various SVM algorithms. Users should note that the suggested packages 'rtracklayer', 'GenomicRanges', 'BSgenome', 'BiocGenerics', 'Biostrings', 'GenomeInfoDb', 'IRanges', and 'S4Vectors' are all BioConductor packages <https://bioconductor.org>.

Version: 0.83.0 Imports: kernlab, seqinr, utils, ROCR, Rcpp, grDevices, graphics, stats LinkingTo: Rcpp Suggests: rtracklayer, GenomicRanges, BSgenome, BSgenome.Hsapiens.UCSC.hg18.masked, BSgenome.Hsapiens.UCSC.hg19.masked, BiocGenerics, Biostrings, GenomeInfoDb, IRanges, S4Vectors Published: 2023-08-20 DOI: 10.32614/CRAN.package.gkmSVM Author: Mahmoud Ghandi Maintainer: Mike Beer <mbeer at jhu.edu> License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] NeedsCompilation: yes CRAN checks: gkmSVM results Documentation: Downloads: Linking:

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