This extension of the pattern-oriented modeling framework of the 'poems' package provides a collection of modules and functions customized for modeling disease transmission on a population scale in a spatiotemporally explicit manner. This includes seasonal time steps, dispersal functions that track disease state of dispersers, results objects that store disease states, and a population simulator that includes disease dynamics.
Version: 1.0.0 Depends: R (≥ 4.3.0) Imports: purrr (≥ 1.0.0), dplyr (≥ 1.1.3), tibble (≥ 3.2.1), R6 (≥ 2.5.1), cli (≥ 3.6.1), raster (≥ 3.6), qs (≥ 0.25.7), poems (≥ 1.1.0), doParallel (≥ 1.0.16), foreach (≥ 1.5.1), Rcpp LinkingTo: Rcpp, RcppArmadillo Suggests: testthat (≥ 3.0.0), geosphere (≥ 1.5), knitr (≥ 1.17), rmarkdown (≥ 1.6) Published: 2024-10-02 DOI: 10.32614/CRAN.package.epizootic Author: July Pilowsky [aut, cre], National Science Foundation Biology Integration Institute 2213854 [fnd] Maintainer: July Pilowsky <pilowskyj at caryinstitute.org> BugReports: https://github.com/viralemergence/epizootic/issues License: GPL (≥ 3) URL: https://github.com/viralemergence/epizootic NeedsCompilation: yes Materials: README, NEWS CRAN checks: epizootic results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=epizootic to link to this page.
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