Provides some tools for developing and validating prediction models, estimate expected survival of patients and visualize them graphically. Most of the implemented methods are based on penalized regressions such as: the lasso (Tibshirani R (1996)), the elastic net (Zou H et al. (2005) <doi:10.1111/j.1467-9868.2005.00503.x>), the adaptive lasso (Zou H (2006) <doi:10.1198/016214506000000735>), the stability selection (Meinshausen N et al. (2010) <doi:10.1111/j.1467-9868.2010.00740.x>), some extensions of the lasso (Ternes et al. (2016) <doi:10.1002/sim.6927>), some methods for the interaction setting (Ternes N et al. (2016) <doi:10.1002/bimj.201500234>), or others. A function generating simulated survival data set is also provided.
Version: 1.0.2 Depends: R (≥ 2.10), pkgconfig Imports: cobs, corpcor, devtools, glmnet, graphics, grplasso, MASS, Matrix, mboost, parallel, plsRcox, pROC, PRROC, RCurl, stats, survAUC, survival Published: 2018-12-04 DOI: 10.32614/CRAN.package.biospear Author: Nils Ternes [aut], Federico Rotolo [aut], Stefan Michiels [aut, cre] Maintainer: Stefan Michiels <stefan.michiels at gustaveroussy.fr> License: GPL-2 NeedsCompilation: no CRAN checks: biospear results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=biospear to link to this page.
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