Streamlined workflow from deconvolution of bulk RNA-seq data to downstream differential expression and gene-set enrichment analysis. Provide various visualization functions.
Version: 1.0.0 Depends: dplyr, edgeR, foreach, ggplot2, R (≥ 2.10), Seurat Imports: data.table, gtools, harmony, MASS, Matrix, NMF, reshape2, Biobase, mgcv, grDevices, glmGamPoi Suggests: FARDEEP, reticulate, plotly, DESeq2, knitr, limma, nnls, preprocessCore, rmarkdown, scater, scran, SingleCellExperiment, doFuture, future, sctransform, Linnorm Published: 2024-03-22 DOI: 10.32614/CRAN.package.SCdeconR Author: Yuanhang Liu [aut, cre] Maintainer: Yuanhang Liu <liu.yuanhang at mayo.edu> License: GPL (≥ 3) URL: https://github.com/Liuy12/SCdeconR/, https://liuy12.github.io/SCdeconR/ NeedsCompilation: no Materials: README NEWS CRAN checks: SCdeconR results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=SCdeconR to link to this page.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4