Implements various tests, visualizations, and metrics for diagnosing convergence of MCMC chains in phylogenetics. It implements and automates many of the functions of the AWTY package in the R environment, as well as a host of other functions. Warren, Geneva, and Lanfear (2017), <doi:10.1093/molbev/msw279>.
Version: 1.0.3 Depends: R (≥ 3.3.0), ape, ggplot2 Imports: reshape2, phangorn, coda, viridis, grid, plyr, ggdendro, GGally, parallel, TreeDist Suggests: knitr, testthat, markdown, rmarkdown, stringi Published: 2025-03-27 DOI: 10.32614/CRAN.package.rwty Author: Dan Warren [aut, cre], Anthony Geneva [aut], Rob Lanfear [aut], Luke Harmon [ctb], April Wright [ctb], Diego Mallo [ctb], Klaus Schliep [ctb], Kelly Luke [ctb], Kendall Michelle [ctb], Smith Martin [ctb] Maintainer: Dan Warren <dan.l.warren at gmail.com> License: GPL-2 NeedsCompilation: no Citation: rwty citation info Materials: README CRAN checks: rwty results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=rwty to link to this page.
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