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CRAN: Package flowTraceR

flowTraceR: Tracing Information Flow for Inter-Software Comparisons in Mass Spectrometry-Based Bottom-Up Proteomics

Useful functions to standardize software outputs from ProteomeDiscoverer, Spectronaut, DIA-NN and MaxQuant on precursor, modified peptide and proteingroup level and to trace software differences for identifications such as varying proteingroup denotations for common precursor.

Version: 0.1.1 Depends: R (≥ 2.10) Imports: comprehenr, dplyr, ggplot2, magrittr, stringr, tibble, tidyr Suggests: data.table, kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2025-04-29 DOI: 10.32614/CRAN.package.flowTraceR Author: Oliver Kardell [aut, cre] Maintainer: Oliver Kardell <Okdll at gmx.net> License: MIT + file LICENSE URL: https://github.com/OKdll/flowTraceR NeedsCompilation: no Materials: README NEWS CRAN checks: flowTraceR results Documentation: Downloads: Reverse dependencies: Linking:

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