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CRAN: Package LoopRig

LoopRig: Integration and Analysis of Chromatin Loop Data

Common coordinate-based workflows involving processed chromatin loop and genomic element data are considered and packaged into appropriate customizable functions. Includes methods for linking element sets via chromatin loops and creating consensus loop datasets.

Version: 0.1.1 Depends: R (≥ 3.4.0) Imports: GenomicRanges, IRanges, utils, S4Vectors Suggests: testthat, knitr, rmarkdown, covr Published: 2019-12-20 DOI: 10.32614/CRAN.package.LoopRig Author: Hassaan Maan [aut, cre] Maintainer: Hassaan Maan <hurmaan99 at gmail.com> License: GPL-3 | file LICENSE NeedsCompilation: no Materials: README NEWS CRAN checks: LoopRig results Documentation: Reference manual: LoopRig.pdf Vignettes: LoopRig-Tutorial (source, R code)
Downloads: Package source: LoopRig_0.1.1.tar.gz Windows binaries: r-devel: LoopRig_0.1.1.zip, r-release: LoopRig_0.1.1.zip, r-oldrel: LoopRig_0.1.1.zip macOS binaries: r-release (arm64): LoopRig_0.1.1.tgz, r-oldrel (arm64): LoopRig_0.1.1.tgz, r-release (x86_64): LoopRig_0.1.1.tgz, r-oldrel (x86_64): LoopRig_0.1.1.tgz Linking:

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