It makes the creation of networks from sequences of RNA, with this is done the abstraction of characteristics of these networks with a methodology of threshold for the purpose of making a classification between the classes of the sequences. There are four data present in the 'BASiNET' package, "sequences", "sequences2", "sequences-predict" and "sequences2-predict" with 11, 10, 11 and 11 sequences respectively. These sequences were taken from the data set used in the article (LI, Aimin; ZHANG, Junying; ZHOU, Zhongyin, 2014) <doi:10.1186/1471-2105-15-311>, these sequences are used to run examples. The BASiNET was published on Nucleic Acids Research, (ITO, Eric; KATAHIRA, Isaque; VICENTE, Fábio; PEREIRA, Felipe; LOPES, FabrÃcio, 2018) <doi:10.1093/nar/gky462>.
Version: 0.0.5 Depends: R (≥ 3.4.0) Imports: igraph, Biostrings, RWeka, randomForest, rmcfs, grDevices, graphics, stats, rJava Suggests: knitr, rmarkdown Published: 2022-08-19 DOI: 10.32614/CRAN.package.BASiNET Author: Eric Augusto Ito [aut], Fabricio Martins Lopes [aut, cre] Maintainer: Fabricio Martins Lopes <fabricio at utfpr.edu.br> License: GPL-3 NeedsCompilation: no In views: NetworkAnalysis, Omics CRAN checks: BASiNET results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=BASiNET to link to this page.
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